• Photonics Research
  • Vol. 10, Issue 9, 2247 (2022)
You Zhou1、†, Bo Xiong2、3、†, Weizhi Song1, Xu Zhang4, Guoan Zheng5, Qionghai Dai2、3、6、*, and Xun Cao1、7、*
Author Affiliations
  • 1School of Electronic Science and Engineering, Nanjing Universityhttps://ror.org/01rxvg760, Nanjing 210023, China
  • 2Department of Automation, Tsinghua University, Beijing 100084, China
  • 3Institute for Brain and Cognitive Sciences, Tsinghua University, Beijing 100084, China
  • 4Beijing Institute of Collaborative Innovation, Beijing 100094, China
  • 5Department of Biomedical Engineering, University of Connecticut, Storrs, Connecticut 06269, USA
  • 6e-mail: qhdai@mail.tsinghua.edu.cn
  • 7e-mail: caoxun@nju.edu.cn
  • show less
    DOI: 10.1364/PRJ.464051 Cite this Article Set citation alerts
    You Zhou, Bo Xiong, Weizhi Song, Xu Zhang, Guoan Zheng, Qionghai Dai, Xun Cao. Light-field micro-endoscopy using a fiber bundle: a snapshot 3D epi-fluorescence endoscope[J]. Photonics Research, 2022, 10(9): 2247 Copy Citation Text show less
    References

    [1] H. Tajiri. Autofluorescence endoscopy for the gastrointestinal tract. Proc. Jpn. Acad. B, 83, 248-255(2007).

    [2] H. Messmann, E. Endlicher, G. Freunek, P. Rümmele, J. Schoelmerich, R. Knüchel. Fluorescence endoscopy for the detection of low and high grade dysplasia in ulcerative colitis using systemic or local 5-aminolaevulinic acid sensitisation. Gut, 52, 1003-1007(2003).

    [3] H. Messmann, E. Endlicher, C. Gelbmann, J. Schoelmerich. Fluorescence endoscopy and photodynamic therapy. Dig. Liver Dis., 34, 754-761(2002).

    [4] J. J. Tjalma, M. Koller, M. D. Linssen, E. Hartmans, S. De Jongh, A. Jorritsma-Smit, A. Karrenbeld, E. G. de Vries, J. H. Kleibeuker, J. P. Pennings, K. Havenga, P. H. Hemmer, G. A. Hospers, B. van Etten, V. Ntziachristos, G. M. van Dam, D. J. Robinson, W. B. Nagengast. Quantitative fluorescence endoscopy: an innovative endoscopy approach to evaluate neoadjuvant treatment response in locally advanced rectal cancer. Gut, 69, 406-410(2020).

    [5] A. D. Jacob, A. I. Ramsaran, A. J. Mocle, L. M. Tran, C. Yan, P. W. Frankland, S. A. Josselyn. A compact head-mounted endoscope for in vivo calcium imaging in freely behaving mice. Curr. Protoc. Neurosci., 84, e51(2018).

    [6] Z. Qin, C. Chen, S. He, Y. Wang, K. F. Tam, N. Y. Ip, J. Y. Qu. Adaptive optics two-photon endomicroscopy enables deep-brain imaging at synaptic resolution over large volumes. Sci. Adv., 6, eabc6521(2020).

    [7] W. Zong, R. Wu, M. Li, Y. Hu, Y. Li, J. Li, H. Rong, H. Wu, Y. Xu, Y. Lu, H. Jia, M. Fan, Z. Zhou, Y. Zhang, A. Wang, L. Chen, H. Cheng. Fast high-resolution miniature two-photon microscopy for brain imaging in freely behaving mice. Nat. Methods, 14, 713-719(2017).

    [8] S. A. Vasquez-Lopez, R. Turcotte, V. Koren, M. Plöschner, Z. Padamsey, M. J. Booth, T. Čižmár, N. J. Emptage. Subcellular spatial resolution achieved for deep-brain imaging in vivo using a minimally invasive multimode fiber. Light Sci. Appl., 7, 110(2018).

    [9] A. Hassanfiroozi, Y.-P. Huang, B. Javidi, H.-P. D. Shieh. Hexagonal liquid crystal lens array for 3D endoscopy. Opt. Express, 23, 971-981(2015).

    [10] Y. Zhang, M. L. Akins, K. Murari, J. Xi, M.-J. Li, K. Luby-Phelps, M. Mahendroo, X. Li. A compact fiber-optic SHG scanning endomicroscope and its application to visualize cervical remodeling during pregnancy. Proc. Natl. Acad. Sci. USA, 109, 12878-12883(2012).

    [11] Z. Qiu, W. Piyawattanametha. MEMS actuators for optical microendoscopy. Micromachines, 10, 85(2019).

    [12] B. A. Flusberg, A. Nimmerjahn, E. D. Cocker, E. A. Mukamel, R. P. Barretto, T. H. Ko, L. D. Burns, J. C. Jung, M. J. Schnitzer. High-speed, miniaturized fluorescence microscopy in freely moving mice. Nat. Methods, 5, 935-938(2008).

    [13] E. R. Andresen, S. Sivankutty, V. Tsvirkun, G. Bouwmans, H. Rigneault. Ultrathin endoscopes based on multicore fibers and adaptive optics: a status review and perspectives. J. Biomed. Opt., 21, 121506(2016).

    [14] B. A. Flusberg, E. D. Cocker, W. Piyawattanametha, J. C. Jung, E. L. Cheung, M. J. Schnitzer. Fiber-optic fluorescence imaging. Nat. Methods, 2, 941-950(2005).

    [15] C. Xia, M. A. Eftekhar, R. A. Correa, J. E. Antonio-Lopez, A. Schülzgen, D. Christodoulides, G. Li. Supermodes in coupled multi-core waveguide structures. IEEE J. Sel. Top. Quantum Electron., 22, 196-207(2015).

    [16] V. Szabo, C. Ventalon, V. De Sars, J. Bradley, V. Emiliani. Spatially selective holographic photoactivation and functional fluorescence imaging in freely behaving mice with a fiberscope. Neuron, 84, 1157-1169(2014).

    [17] R. Florentin, V. Kermene, J. Benoist, A. Desfarges-Berthelemot, D. Pagnoux, A. Barthélémy, J.-P. Huignard. Shaping the light amplified in a multimode fiber. Light Sci. Appl., 6, e16208(2017).

    [18] N. Badt, O. Katz. Label-free video-rate micro-endoscopy through flexible fibers via Fiber Bundle Distal Holography (FiDHo)(2021).

    [19] J. Shin, D. N. Tran, J. R. Stroud, S. Chin, T. D. Tran, M. A. Foster. A minimally invasive lens-free computational microendoscope. Sci. Adv., 5, eaaw5595(2019).

    [20] A. Orth, M. Ploschner, E. Wilson, I. Maksymov, B. Gibson. Optical fiber bundles: ultra-slim light field imaging probes. Sci. Adv., 5, eaav1555(2019).

    [21] A. Orth, M. Ploschner, I. S. Maksymov, B. C. Gibson. Extended depth of field imaging through multicore optical fibers. Opt. Express, 26, 6407-6419(2018).

    [22] C. Guo, T. Urner, S. Jia. 3D light-field endoscopic imaging using a GRIN lens array. Appl. Phys. Lett., 116, 101105(2020).

    [23] T. M. Urner, A. Inman, B. Lapid, S. Jia. Three-dimensional light-field microendoscopy with a GRIN lens array. Biomed. Opt. Express, 13, 590-607(2022).

    [24] J. Liu, D. Claus, T. Xu, T. Kessner, A. Herkommer, W. Osten. Light field endoscopy and its parametric description. Opt. Lett., 42, 1804-1807(2017).

    [25] Y. Xue, I. G. Davison, D. A. Boas, L. Tian. Single-shot 3D wide-field fluorescence imaging with a computational miniature mesoscope. Sci. Adv., 6, eabb7508(2020).

    [26] K. Yanny, N. Antipa, W. Liberti, S. Dehaeck, K. Monakhova, F. L. Liu, K. Shen, R. Ng, L. Waller. Miniscope3D: optimized single-shot miniature 3D fluorescence microscopy. Light Sci. Appl., 9, 171(2020).

    [27] M. Broxton, L. Grosenick, S. Yang, N. Cohen, A. Andalman, K. Deisseroth, M. Levoy. Wave optics theory and 3-D deconvolution for the light field microscope. Opt. Express, 21, 25418-25439(2013).

    [28] R. Prevedel, Y.-G. Yoon, M. Hoffmann, N. Pak, G. Wetzstein, S. Kato, T. Schrödel, R. Raskar, M. Zimmer, E. S. Boyden, A. Vaziri. Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy. Nat. Methods, 11, 727-730(2014).

    [29] Y. Zhang, B. Xiong, Y. Zhang, Z. Lu, J. Wu, Q. Dai. DiLFM: an artifact-suppressed and noise-robust light-field microscopy through dictionary learning. Light Sci. Appl., 10, 152(2021).

    [30] Z. Lu, J. Wu, H. Qiao, Y. Zhou, T. Yan, Z. Zhou, X. Zhang, J. Fan, Q. Dai. Phase-space deconvolution for light field microscopy. Opt. Express, 27, 18131-18145(2019).

    [31] M. Gu, H. Bao, H. Kang. Fibre-optical microendoscopy. J. Microsc., 254, 13-18(2014).

    [32] R. P. Barretto, T. H. Ko, J. C. Jung, T. J. Wang, G. Capps, A. C. Waters, Y. Ziv, A. Attardo, L. Recht, M. J. Schnitzer. Time-lapse imaging of disease progression in deep brain areas using fluorescence microendoscopy. Nat. Med., 17, 223-228(2011).

    [33] H. Pahlevaninezhad, M. Khorasaninejad, Y.-W. Huang, Z. Shi, L. P. Hariri, D. C. Adams, V. Ding, A. Zhu, C.-W. Qiu, F. Capasso, M. J. Suter. Nano-optic endoscope for high-resolution optical coherence tomography in vivo. Nat. Photonics, 12, 540-547(2018).

    [34] M. Chen, Z. F. Phillips, L. Waller. Quantitative differential phase contrast (DPC) microscopy with computational aberration correction. Opt. Express, 26, 32888-32899(2018).

    [35] J. Chung, G. W. Martinez, K. C. Lencioni, S. R. Sadda, C. Yang. Computational aberration compensation by coded-aperture-based correction of aberration obtained from optical Fourier coding and blur estimation. Optica, 6, 647-661(2019).

    [36] S. Abrahamsson, J. Chen, B. Hajj, S. Stallinga, A. Y. Katsov, J. Wisniewski, G. Mizuguchi, P. Soule, F. Mueller, C. D. Darzacq, X. Darzacq, C. Wu, C. I. Bargmann, D. A. Agard, M. Dahan, M. G. L. Gustafsson. Fast multicolor 3D imaging using aberration-corrected multifocus microscopy. Nat. Methods, 10, 60-63(2013).

    You Zhou, Bo Xiong, Weizhi Song, Xu Zhang, Guoan Zheng, Qionghai Dai, Xun Cao. Light-field micro-endoscopy using a fiber bundle: a snapshot 3D epi-fluorescence endoscope[J]. Photonics Research, 2022, 10(9): 2247
    Download Citation