BINARY TISSUE CLASSIFICATION STUDIESON RESECTED HUMAN BREAST TISSUES USING OPTICAL COHERENCE TOMOGRAPHY IMAGES

M. BHATTACHARJEE; P. C. ASHOK; K. DIVAKAR RAO; S. K. MAJUMDER; Y. VERMA; P. K. GUPTA

doi:10.1142/s1793545811001083

[1] A. F. Fercher, W. Drexler, C. K. Hitzenberger, T. Lasser, "Optical coherence tomography — Principles and applications," Rep. Prog. Phys. 66, 239 303 (2003).

[2] A. Gh. Podoleanu, "Optical coherence tomography," Br. J. Radiol. 78, 976-988 (2005).

[3] K. D. Rao, A. Alex, Y. Verma, S. Thampi, P. K. Gupta, "Real-time in vivo imaging of adult Zebrafish brain using optical coherence tomography," J. Biophotonics 2, 288-291 (2009).

[4] K. W. Gossage, T. Tkaczyk, J. Rodriguez, J. K. Barton, "Texture analysis of optical coherence tomography images: Feasibility for tissue classification," J. Biomed. Opt. 8, 570-575 (2003).

[5] S. A. Boppart, W. Luo, D. L.Marks, K. W. Singletary, "Optical coherence tomography: Feasibility for basic research and image-guided surgery of breast cancer," Breast Cancer Res. Treat. 84, 85-97 (2004).

[6] K. W. Gossage, C. M. Smith, E. M. Kanter, L. P. Hariri, A. L. Stone, J. J. Rodriguez, S. K. Williams, J. K. Barton, "Texture analysis of speckle in optical coherence tomography images of tissue phantoms," Phys. Med. Biol. 51, 1563-1575 (2006).

[7] A. M. Zysk, S. A. Boppart, "Computational methods for analysis of human breast tumor tissue in optical coherence tomography images," J. Biomed. Opt. 11, 054015 (2006).

[8] M. Mujat, D. R. Ferguson, D. X. Hammer, C. Gittins, M. Iftimia, "Automated algorithm for breast tissue differentiation in optical coherence tomography," J. Biomed. Opt. 14, 034040 (2009).

[9] A. Luntz, V. Brailovsky, "On estimation of characters obtained in statistical procedure of recognition (in Russian)," Techicheskaya Kibernetica 3, (1969).

[10] G. C. Cawley, N. L. C. Talbot, "Efficient leave-oneout cross validation of kernel Fisher discriminant classifiers," Pattern Recogn. 36, 2585-2592 (2003).

[11] Y. Verma, K. D. Rao, M. K. Suresh, H. S. Patel, P. K. Gupta, "Measurement of gradient refractive index profile of crystalline lens of fisheye in vivo using optical coherence tomography," Appl. Phys. B 87, 607-610 (2007).

[12] B. D. Goldberg, N. V. Iftimia, J. E. Bressner, M. B. Pitman, E. Halpern, B. E. Bouma, G. J. Tearney, "Automated algorithm for differentiation of human breast tissue using low coherence interferometry for fine needle aspiration biopsy guidance," J. Biomed. Opt. 13, 014014 (2008).

[13] R. M. Haralick, K. Shanmugam, I. Dinstein, "Texture features for image classification," IEEE Trans. Syst. Man Cybern. SMC 3, 610-621 (1973).

[14] F. Argenti, L. Alparone, G. Benelli, "Fast algorithms for texture analysis using co-occurrence matrices," IEEE Proc., Pt. F 137, 443-448 (1990).

[15] B. Liefeng, L. Wang, L. Jiao, "Feature scaling for kernel Fisher discriminant analysis using leave-oneout cross validation," Neural Comput. 18, 961-978 (2006).

[16] S. Mika, G. Ratsch, J. Weston, B. Scholkopf, K. R. Mullers, "Fisher discriminant analysis with kernels," IEEE Signal Proc. Soc., Workshop Berlin (1999).

[17] P. L. Hsiung, D. R. Phatak, Y. Chen, A. D. Aguirre, J. G. Fujimoto, J. L. Connolly, "Benign and malignant lesions in the human breast depicted with ultrahigh resolution and three-dimensional optical coherence tomography," Radiology 244, 865-874 (2007).

[18] S. K. Majumder, N. Ghosh, P. K. Gupta, "Support vector machine for optical diagnosis of cancer," J. Biomed. Opt. 10, 024034 (2005).

[19] S. K. Majumder, N. Ghosh, P. K. Gupta, "Relevance vector machine for optical diagnosis of cancer," Lasers Surg. Med. 36, 323-333 (2005).

[20] J. A. Hanley, B. J. McNeil, "The meaning and use of the area under a receiver operating characteristic (ROC) curve," Radiology 143, 29-36 (1982).

[21] N. V. Iftimia, M. Mujat, T. Ustun, R. D. Ferguson, V. Danthu, D. X. Hammer, "Spectral-domain low coherence interferometry/optical coherence tomography system for fine needle breast biopsy guidance," Rev. Sci. Instrum. 80, 024302 (2009).

[22] P. L. Hsiung, P. R. Nambiar, J. G. Fujimoto, "Effect of tissue preservation on imaging using ultrahigh resolution optical coherence tomography," J. Biomed. Opt. 10, 064033 (2005).

[23] F.T.Nguyen,A.M. Zysk,E.J.Chaney, J.G.Kotynek, U. J. Oliphant, F. J. Bellafiore, K. M. Rowland, P. A. Johnson, S. A. Boppart, "Intraoperative evaluation of breast tumor margins with optical coherence tomography," Cancer Res. 69, 8790-8796 (2009).