• Laser & Optoelectronics Progress
  • Vol. 59, Issue 7, 0717001 (2022)
Zhong Chen1、2, Guangbin Shang1、2, Liu Fu1、2, Ge Liu1、2, Xuan Chen1、2, Qi Zhang3, and Xiaonan Lu3、*
Author Affiliations
  • 1Research Center for Differention and Development of TCM Basic Theory, Jiangxi University of Chinese Medicine, Nanchang , Jiangxi 330004, China
  • 2Jiangxi Province Key Laboratory of TCM Etiopathogenisis, Nanchang , Jiangxi 330004, China
  • 3Experimental Center of Basic Medicine, Jiangxi University of Chinese Medicine, Nanchang , Jiangxi 330004, China
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    DOI: 10.3788/LOP202259.0717001 Cite this Article Set citation alerts
    Zhong Chen, Guangbin Shang, Liu Fu, Ge Liu, Xuan Chen, Qi Zhang, Xiaonan Lu. Transcriptome Characteristics Analysis of Terahertz Wave Inhibited Leukemia K562 Cells Based on RNA Sequencing[J]. Laser & Optoelectronics Progress, 2022, 59(7): 0717001 Copy Citation Text show less
    Effect of terahertz wave on K562 cell viability
    Fig. 1. Effect of terahertz wave on K562 cell viability
    Correlation analysis of samples. (a) Correlation between expressed genes of the blank control group and the intervention group; (b) PCA result of expressed genes of the blank control group and the intervention group
    Fig. 2. Correlation analysis of samples. (a) Correlation between expressed genes of the blank control group and the intervention group; (b) PCA result of expressed genes of the blank control group and the intervention group
    Changes of genes in K562 cells after terahertz wave intervention. (a) Volcano plot of differentially expressed genes; (b) heatmap of top 50 differentially expressed genes by |log2(XFC)|
    Fig. 3. Changes of genes in K562 cells after terahertz wave intervention. (a) Volcano plot of differentially expressed genes; (b) heatmap of top 50 differentially expressed genes by |log2(XFC)|
    Terahertz wave interferes with GO function of K562 cells differentially expressed genes. (a) Up-regulated differentially expressed genes; (b) down-regulated differentially expressed genes
    Fig. 4. Terahertz wave interferes with GO function of K562 cells differentially expressed genes. (a) Up-regulated differentially expressed genes; (b) down-regulated differentially expressed genes
    GO enrichment analysis of K562 up-regulated differentially expressed genes by terahertz wave intervention
    Fig. 5. GO enrichment analysis of K562 up-regulated differentially expressed genes by terahertz wave intervention
    GO enrichment analysis of K562 down-regulated differentially expressed genes by terahertz wave intervention
    Fig. 6. GO enrichment analysis of K562 down-regulated differentially expressed genes by terahertz wave intervention
    KEGG pathway enrichment analysis of differentially expressed genes in K562 cells by terahertz wave intervention. (a) Up-regulated differentially expressed genes; (b) down-regulated differentially expressed genes
    Fig. 7. KEGG pathway enrichment analysis of differentially expressed genes in K562 cells by terahertz wave intervention. (a) Up-regulated differentially expressed genes; (b) down-regulated differentially expressed genes
    KEGG pathway enrichment chord diagram for differentially expressed genes. (a) Up-regulated differentially expressed genes; (b) down-regulated differentially expressed genes
    Fig. 8. KEGG pathway enrichment chord diagram for differentially expressed genes. (a) Up-regulated differentially expressed genes; (b) down-regulated differentially expressed genes
    Core network of protein-protein interactions of differentially expressed genes in K562 cells by terahertz wave intervention
    Fig. 9. Core network of protein-protein interactions of differentially expressed genes in K562 cells by terahertz wave intervention
    SampleClean readsClean bases /GBError rate /%Q20 /%Q30 /%GC /%
    K1484095027.100.024698.1294.5852.99
    K2636653329.370.024598.2094.6853.54
    K3609135108.940.024398.2794.8953.23
    T1639210469.270.024398.2994.9354.00
    T2532713227.790.024298.2994.9453.72
    T3561050908.210.024698.1294.6154.03
    Table 1. Quality assessment of the sequencing data
    Zhong Chen, Guangbin Shang, Liu Fu, Ge Liu, Xuan Chen, Qi Zhang, Xiaonan Lu. Transcriptome Characteristics Analysis of Terahertz Wave Inhibited Leukemia K562 Cells Based on RNA Sequencing[J]. Laser & Optoelectronics Progress, 2022, 59(7): 0717001
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