• Journal of Innovative Optical Health Sciences
  • Vol. 9, Issue 3, 1630002 (2016)
Qiang Yang, Liangcai Cao*, Hua Zhang, Hao Zhang, and Guofan Jin
Author Affiliations
  • State Key Laboratory of Precision Measurement Technology and Instruments Tsinghua University, Beijing 100084, P. R. China
  • show less
    DOI: 10.1142/s1793545816300020 Cite this Article
    Qiang Yang, Liangcai Cao, Hua Zhang, Hao Zhang, Guofan Jin. Method of lateral image reconstruction in structured illumination microscopy with super resolution[J]. Journal of Innovative Optical Health Sciences, 2016, 9(3): 1630002 Copy Citation Text show less
    References

    [1] L. Schermelleh, R. Heintzmann, H. Leonhardt, "A guide to super-resolution fluorescence microscopy," J. Cell Biol. 190(2), 165–175 (2010).

    [2] B. Huang, H. Babcock, X. Zhuang, "Breaking the diffraction barrier: Super-resolution imaging of cells," Cell 143(7), 1047–1058 (2010).

    [3] M. Maglione, S. J. Sigrist, "Seeing the forest tree by tree: Super-resolution light microscopy meets the neurosciences," Nat. Neurosci. 16, 790–797 (2013).

    [4] L. Shao, P. Kner, E. H. Rego, M. G. L. Gustafsson, "Super-resolution 3D microscopy of live whole cells using structured illumination," Nat. Methods 8, 1044–1046 (2011).

    [5] D. Dan, M. Lei, B. L. Yao, W. Wang, M. Winterhalder, A. Zumbusch, Y. J. Qi, L. Xia, S. H. Yan, Y. L. Yang, P. Gao, T. Ye, W. Zhao, "DMD-based LED-illumination super-resolution and optical sectioning microscopy," Sci. Rep. 3, 1116 (2013).

    [6] R. Heintzmann, C. G. Cremer, "Laterally modulated excitation microscopy: Improvement of resolution by using a diffraction grating," Proc. SPIE 3568, 185–196 (1999).

    [7] M. G. Gustafsson, "Surpassing the lateral resolution limit by a factor of two using structured illumination microscopy," J. Microsc. 198(2), 82–87 (2000).

    [8] M. G. Gustafsson, L. Shao, P. M. Carlton, C. J. Wang, I. N. Golubovskaya, W. Z. Cande, D. A. Agard, J. W. Sedat, "Three-dimensional resolution doubling in wide-field fluorescence microscopy by structured illumination," Biophys. J. 94(12), 4957– 4970 (2008).

    [9] R. F€orster, H. W. L. Walther, A. Jost, M. Kielhorn, K. Wicker, R. Heintzmann, "Simple structured illumination microscope setup with high acquisition speed by using a spatial light modulator," Opt. Express 22(17), 20663–20677 (2014).

    [10] A. G. York, S. H. Parekh, D. D. Nogare, R. S. Fischer, K. Temprine, M. Mione, A. B. Chitnis, C. A. Combs, H. Shroff, "Resolution doubling in live, multicellular organisms via multifocal structured illumination microscopy," Nat. Methods 9, 749–754 (2012).

    [11] P. Pankajakshan, Z. Kam, A. Dieterlen, G. Engler, L. B. Feraud, J. Zerubia, J. C. O. Marin, Pointspread function model for fluorescence macroscopy imaging, Proc. Asilomar Conf. Signals, Systems and Computers, pp. 1364–1368 (2010).

    [12] S. F. Gibson, F. Lanni, "Diffraction by a circular aperture as a model for three-dimensional optical microscopy," J. Opt. Soc. Am. A 6(9), 1357–1367 (1989).

    [13] Y. Hiraoka, J. W. Sedat, D. A. Agard, "Determination of three-dimensional imaging properties of a light microscope system," Biophys J. 57(2), 325–333 (1990).

    [14] L. M. Hirvonen, K. Wicker, O. Mandula, R. Heintzmann, "Structured illumination microscopy of a living cell," Eur Biophys J. 38(6), 807–812 (2009).

    [15] D. Dan, B. L. Yao, M. Lei, "Structured illumination microscopy for super-resolution and optical sectioning," Chin. Sci. Bull. 59(12), 1291–1307 (2014).

    [16] K. Wicker, Super-Resolution Fluorescence Microscopy Using Structured Illumination, Super-Resolution Microscopy Techniques in theNeurosciences,Chap.7, E. Fornasiero, S. Rizzoli, Eds., pp. 133–165, Humana Press, G€ottingen (2014).

    [17] P. Kner, B. B. Chhun, E. R. Griffis, L. Winoto, M. G. L. Gustafsson, "Super-resolution video microscopy of live cells by structured illumination," Nat. Methods 6, 339–342 (2009).

    [18] R. Fiolka, L. Shao, E. H. Rego, M. W. Davidson, M. G. L. Gustafsson, "Time-lapse two-color 3D imaging of live cells with doubled resolution using structured illumination," Proc. Natl. Acad. Sci. 109(14), 5311–5315 (2012).

    [19] J. Fitzgibbon, K. Bell, E. King, K. Oparka, "Superresolution imaging of plasmodesmata using threedimensional structured illumination microscopy," Plant Physiol. 153(4), 1453–1463 (2010).

    [20] R. Heintzmann, M. G. L. Gustafsson, "Subdiffraction resolution in continuous samples," Nat. Photon. 3, 362–364 (2009).

    [21] F. Wei, Z. Liu, "Plasmonic structured illumination microscopy," Nano Lett. 10(7), 2531–2536 (2010).

    [22] S. A. Shroff, J.R. Fienup, D. R. Williams, "Phase-shift estimation in sinusoidally illuminated images for lateral superresolution," JOSA A 26(2), 413–424 (2009).

    [23] K. Wicker, O. Mandula, G. Best, R. Fiolka, R. Heintzmann, "Phase optimisation for structured illumination microscopy," Opt. Express 21(2), 2032– 2049 (2013).

    [24] K. Wicker, "Non-iterative determination of pattern phase in structured illumination microscopy using auto-correlations in Fourier space," Opt. Express 21(21), 24692–24701 (2013).

    [25] E. Mudry, K. Belkebir, J. Girard, J. Savatier, E. Le Moal, C. Nicoletti, A. Sentenac, "Structured illumination microscopy using unknown speckle patterns," Nat. Photon. 6(5), 312–315 (2012).

    [26] R. Ayuk, H. Giovannini, A. Jost, E. Mudry, J. Girard, T. Mangeat, N. Sandeau, R. Heintzmann, K. Wicker, K. Belkebir, A. Sentenac, "Structured illumination fluorescence microscopy with distorted excitations using a filtered blind-SIM algorithm," Opt. Lett. 38(22), 4723–4726 (2013).

    [27] A. Jost, E. Tolstik, P. Feldmann, K. Wicker, A. Sentenac, R. Heintzmann, "Optical sectioning and high resolution in single-slice structured illumination microscopy by thick slice blind-SIM reconstruction," PLoS One 10(7), 0132174 (2015).

    [28] R. D. Simmonds, M. J. Booth, "Modelling of multiconjugate adaptive optics for spatially variant aberrations in microscopy," J. Opt. 15(9), 094010 (2013).

    [29] B. Thomas, A. Wolstenholme, S. N. Chaudhari, E. T. Kipreos, P. Kner, "Enhanced resolution through thick tissue with structured illumination and adaptive optics," J. Biomed. Opt. 20(2), 026006 (2015).

    [30] N. G. Chen, S. Rehman, C. J. R. Sheppard, "Advanced optical microscopy methods for in vivo imaging of sub-cellular structures in thick biological tissues," J. Innov. Opt. Health Sci. 7(5), 1440001 (2014).

    Qiang Yang, Liangcai Cao, Hua Zhang, Hao Zhang, Guofan Jin. Method of lateral image reconstruction in structured illumination microscopy with super resolution[J]. Journal of Innovative Optical Health Sciences, 2016, 9(3): 1630002
    Download Citation