[1] D. C. Fernandez, H. M. Salinas, C. A. Puliafito, "Automated detection of retinal layer structures on optical coherence tomography images," Opt. Express 13(25), 10200–10216 (2005).
[2] M. Mujat, R. C. Chan, B. Cense, B. H. Park, C. Joo, T. Akkin, T. C. Chen, J. F. de Boer, "Retinal nerve fiber layer thickness map determined from optical coherence tomography images," Opt. Express 13(23), 9480–9491 (2005).
[3] H. Ishikawa, D. M. Stein, G. Wollstein, S. Beaton, J. G. Fujimoto, J. S. Schuman, "Macular segmentation with optical coherence tomography," Invest. Ophthalmol. Vis. Sci. 46(6), 2012–2017 (2005).
[4] S. J. Chiu, X. T. Li, P. Nicholas, C. A. Toth, J. A. Izatt, S. Farsiu, "Automatic segmentation of seven retinal layers in SD-OCT images congruent with expert manual segmentation," Opt. Express 18(18), 19413–19428 (2010).
[5] P. P. Srinivasan, S. J. Heflin, J. A. Izatt, V. Y. Arshavsky, S. Farsiu, "Automatic segmentation of up to ten layer boundaries in SD-OCT images of the mouse retina with and without missing layers due to pathology," Biomed. Opt. Express 5(2), 348–365 (2014).
[6] F. LaRocca, S. J. Chiu, R. P. McNabb, A. N. Kuo, J. A. Izatt, S. Farsiu, "Robust automatic segmentation of corneal layer boundaries in SD-OCT images using graph theory and dynamic programming," Biomed. Opt. Express 2(6), 1524–1538 (2011).
[7] S. Farsiu, S. J. Chiu, R. V. O'Connell, F. A. Folgar, E. Yuan, J. A. Izatt, C. A. Toth, "Quantitative Classification of Eyes with and without Intermediate Age-related Macular Degeneration Using Optical Coherence Tomography," Ophthalmology 121(1), 162–172 (2014).
[8] S. J. Chiu, M. J. Allingham, P. S. Mettu, S. W. Cousins, J. A. Izatt, S. Farsiu, "Kernel regression based segmentation of optical coherence tomography images with diabetic macular edema," Biomed. Opt. Express 6(4), 1172–1194 (2015).
[9] Q. Yang, D. C. K. Hood, K. Chan, C. A. Reisman et al., "Automated layer segmentation of macular OCT images using dual-scale gradient information," Opt. Express 18(20), 21293–21307 (2010).
[10] Q. Yang, C. A. Reisman, K. Chan, R. Ramachandran, A. Raza, D. C. Hood, Automated segmentation of outer retinal layers in macular OCT images of patients with retinitis pigmentosa, Biomed. Opt. Express 9(2), 2493–2503 (2011).
[11] A. Yazdanpanah, G. Hamarneh, B. R. Smith, M. V. Sarunic, "Segmentation of intra-retinal layers from optical coherence tomography images using an active contour approach," IEEE Trans. Med. Imaging 30(2), 484–496 (2011).
[12] A. Mishra, A. Wong, K. Bizheva, D. A. Clausi, "Intra-retinal layer segmentation in optical coherence tomography images," Opt. Express 17(26), 23719–23728 (2009).
[13] G. Itebeddine, R. Florence, I. Bloch, S. Tick, M. Paques, "Automated segmentation of macular layers in OCT images and quantitative evaluation of performances," Pattern Recognit. 44(8), 1590–1603 (2011).
[14] A. R. Fuller, R. J. Zawadzki, S. Choi, D. F. Wiley, J. S. Werner, B. Hamann, "Segmentation of threedimensional retinal image data," IEEE Trans. Vis. Comput. Graphics 13(6), 1719–1726 (2007).
[15] R. J. Zawadzki, A. R. Fuller, D. F. Wiley, B. Hamann et al., "Adaptation of a support vector machine algorithm for segmentation and visualization of retinal structures in volumetric optical coherence tomography data sets," J. Biomed. Opt. 12(4), 041206 (2007).
[16] K. A. Vermeer, J. van der Schoot, H. G. Lemij, J. F. de Boer, "Automated segmentation by pixel classifi- cation of retinal layers in ophthalmic OCT images," Biomed. Opt. Express 2(6), 1743–1756 (2011).
[17] A. Lang, A. Carass, M. Hauser, E. S. Sotirchos, P. A. Calabresi, H. S. Ying, J. L. Prince, "Retinal layer segmentation of macular OCT images using boundary classification," Biomed. Opt. Express 4(7), 1133–1152 (2013).
[18] V. Kaji , B. Pova ay, B. Hermann, B. Hofer, D. Marshall, P. L. Rosin, W. Drexler, "Robust segmentation of intraretinal layers in the normal human fovea using a novel statistical model based on texture and shape analysis," Opt. Express 18(14), 14644–146 (2010).
[19] M. K. Garvin, M. D. Abràmoff, R. Kardon, S. R. Russell et al., "Intraretinal layer segmentation of macular optical coherence tomography images using optimal 3-D graph search," IEEE Trans. Med. Imaging 10(10), 1495–1505 (2008).
[20] M. K. Garvin, M. D. Abràmoff, X. Wu, S. R. Russell et al., "Automated 3-D intraretinal layer segmentation of macular spectral-domain optical coherence tomography Images," IEEE Trans. Med. Imaging 28(9), 1436–1447 (2009).
[21] P. A. Dufour, L. Ceklic, H. Abdillahi, S. Schr€oder, S. De Dzanet, U. Wolf-Schnurrbusch, J. Kowal, "Graph-based multi-surface segmentation of OCT data using trained hard and soft constraints," IEEE Trans. Med. Imaging 32(3), 531–543 (2013).
[22] K. Lee, M. Niemeijer, M. K. Garvin, Y. H. Kwon, M. Sonka, M. D. Abràmoff, "Segmentation of the optic disc in 3-D OCT scans of the optic nerve head," IEEE Trans. Med. Imaging 29(1), 159–168 (2010).
[23] K. Raheleh, H. Rabbani, M. D. Abramoff, M. Sonka, "Intra-retinal layer segmentation of 3D optical coherence tomography using coarse grained diffusion map," Med. Image Anal 17, 907–928 (2013).
[24] H. Bogunovic, M. Sonka, Y. H. Kwon, P. Kemp, M. D. Abramoff, Wu Xiaodong, "Multi-surface and multi-field co-segmentation of 3-D retinal optical coherence tomography," IEEE Trans. Med. Imaging 33(12), 2242-2253 (2014).
[25] F. Shi, X. Chen, H. Zhao, W. Zhu, D. Xiang, E. Gao, M. Sonka, H. Chen. "Automated 3-D retinal layer segmentation of macular optical coherence tomography images with serous pigment epithelial detachments," IEEE Trans. Med. Imaging 34(2), 441–452 (2015).
[26] J. Tian, B. Varga, G. M. Somfai, W.-H. Lee, W. E. Smiddy, D. Cabrera DeBuc, "Real-time automatic segmentation of optical coherence tomography volume data of the macular region," PLoS ONE 10(8), e0133908 (2015). doi:10.1371/journal.pone.0133908.
[27] T. Fabritius, S. Makita, M. Miura, M. Risto, Y. Yoshiaki, "Automated segmentation of the macula by optical coherence tomography," Opt. Express, 17(18), 15659 (2009).
[28] S. Niu, Q. Chen, L. de Sisternes, D. L. Rubin, W. Zhang, Q. Liu," Automated retinal layers segmentation in SD-OCT images using dual-gradient and spatial correlation smoothness constraint," Comput. Biol. Med. 54, 116–128 (2014).
[29] Y. Xin, R. C. Jennifer, R. K. Wang, "User-guided segmentation for volumetric retinal optical coherence tomography images," J. Biomed. Opt. 19(8), e086020 (2014). doi:10.1117/1.JBO.19.8.086020.
[30] R. Kafieh, H. Rabbani, I. Selesnick, "Three dimensional data-driven multi scale atomic representation of optical coherence tomography," IEEE Trans. Med. Imaging 34(5), 1042–1062 (2015).
[31] H. Chen, X. Chen, Z. Qiu, D. Xiang, W. Chen, F. Shi, J. Zheng, W. Zhu, M. Sonka, "Quantitative analysis of retinal layers' optical intensities on 3D optical coherence tomography for central retinal artery occlusion," Scientific Reports, Scientific Reports 5, Article number: 9269 (2015).
[32] C. Wang, Y. Wang, D. Kaba, H. Zhu, Y. Lv, Z. Wang, X. Liu, Y. Li, "Segmentation of intraretinal layers in 3D optic nerve head images," Image and Graphics: 8th International Conference, ICIG 2015, Tianjin, China, August 13–16 2015, Proceedings, Lecture Notes in Computer Science, Springer, pp. 321–332, (2015).
[33] C. Wang, Y. Wang, D. Kaba, Z. Wang, X. Liu, Y. Li, "Automated layer segmentation of 3D macular images using hybrid methods," Image and Graphics: 8th International Conference, ICIG 2015, Tianjin, China, August 13–16 2015, Proceedings, Lecture Notes in Computer Science, Springer, pp. 614–628, (2015).