• Acta Optica Sinica
  • Vol. 38, Issue 10, 1017001 (2018)
Xiaowei He*, Yi Sun***, Xiao Wei, Di Lu, Xin Cao**, and Yuqing Hou
Author Affiliations
  • School of Information Sciences and Technology, Northwest University, Xi'an, Shaanxi 710127, China
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    DOI: 10.3788/AOS201838.1017001 Cite this Article Set citation alerts
    Xiaowei He, Yi Sun, Xiao Wei, Di Lu, Xin Cao, Yuqing Hou. Denoising Algorithm of Cerenkov Luminescence Images Based on Spatial Information Improved Clustering[J]. Acta Optica Sinica, 2018, 38(10): 1017001 Copy Citation Text show less
    (a) CLI image of vivo experiment; (b) histogram of CLI image
    Fig. 1. (a) CLI image of vivo experiment; (b) histogram of CLI image
    CLI images in numerical simulation. (a) Digital mouse, CL source location is the red point in blue circle; (b) simulated CLI image; (c) simulated CLI image after adding noises
    Fig. 2. CLI images in numerical simulation. (a) Digital mouse, CL source location is the red point in blue circle; (b) simulated CLI image; (c) simulated CLI image after adding noises
    Denoising results of median filter algorithm with sliding window sizes of (a) 3, (b) 5, and (c) 7, as well as (d) denoising result of FLICMTV algorithm
    Fig. 3. Denoising results of median filter algorithm with sliding window sizes of (a) 3, (b) 5, and (c) 7, as well as (d) denoising result of FLICMTV algorithm
    RMSE and SSIM of median filter and FLICMTV denoising algorithms. (a) RMSE of ROI; (b) SSIM of ROI; (c) RMSE; (b) SSIM
    Fig. 4. RMSE and SSIM of median filter and FLICMTV denoising algorithms. (a) RMSE of ROI; (b) SSIM of ROI; (c) RMSE; (b) SSIM
    Results of physical phantom experiment. (a) Original CLI image; (b) denoised CLI image with FLICMTV algorithm; (c) denoised CLI image with median filter algorithm with sliding window size of 5; (d) pixel intensity at red lines; (e) SSIM of different denoising algorithms in yellow rectangle
    Fig. 5. Results of physical phantom experiment. (a) Original CLI image; (b) denoised CLI image with FLICMTV algorithm; (c) denoised CLI image with median filter algorithm with sliding window size of 5; (d) pixel intensity at red lines; (e) SSIM of different denoising algorithms in yellow rectangle
    Results of in vivo experiment. (a) White-light image of mouse, pseudotumor area is outlined in red circle; (b) original CLI image; (c) denoised CLI image with FLICMTV algorithm; (d) denoised CLI image with median filter algorithm with sliding window size of 5; (e) RMSE and (f) SSIM (red circle and all picture) for median filter and FLICMTV algorithms; (g) mean pixel intensity of ROI in fig. 6 (b), (c), and (d), respectively
    Fig. 6. Results of in vivo experiment. (a) White-light image of mouse, pseudotumor area is outlined in red circle; (b) original CLI image; (c) denoised CLI image with FLICMTV algorithm; (d) denoised CLI image with median filter algorithm with sliding window size of 5; (e) RMSE and (f) SSIM (red circle and all picture) for median filter and FLICMTV algorithms; (g) mean pixel intensity of ROI in fig. 6 (b), (c), and (d), respectively
    Begin
    Initialization: Get threshold value T by analyzing histogram of CLI image.
    Step 1: Using FLICM algorithm for dividing CLI image to 3 categories (background, signal, and noise).
    Step 2: Using (16) formula for removing isolated of each image.
    Step 3: Using (17) formula for filling holes of each image.
    Step 4: Overlaying image to generate denoised CLI image.
    Step 5: Using (18) formula for removing pixel with value greater than T.
    Step 6: Using TV model for imaging inpainting.
    End
    Table 1. FLICMTV denosing algorithm
    Xiaowei He, Yi Sun, Xiao Wei, Di Lu, Xin Cao, Yuqing Hou. Denoising Algorithm of Cerenkov Luminescence Images Based on Spatial Information Improved Clustering[J]. Acta Optica Sinica, 2018, 38(10): 1017001
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