Review of the development of differential phase contrast microscopy

Fan Yao; Chen Qian; Sun Jiasong; Zhang Zuxin; Lu Linpeng; Zuo Chao

doi:10.3788/irla201948.0603014

[1] Mertz J. Introduction to Optical Microscopy[M]. Colorado: Roberts, 2010: 138.

[2] Arnison M R, Larkin K G, Sheppard C J R, et al. Linear phase imaging using differential interference contrast microscopy[J]. Journal of Microscopy, 2004, 214(1): 7.

[3] Zernike F. How I discovered phase contrast[J]. Science, 1955, 121(3141): 345-349.

[4] Burch C, Stock J. Phase-contrast microscopy[J]. Journal of Scientific Instruments, 1942, 19(5): 71.

[5] Hamilton D, Sheppard C. Differential phase contrast in scanning optical microscopy[J]. Journal of Microscopy, 1984, 133(1): 27.

[6] Hamilton D K, Sheppard C J R, Wilson T. Improved imaging of phase gradients in scanning optical microscopy[J]. Journal of Microscopy, 1984, 135(3): 275.

[7] Kim Y, Shim H, Kim K, et al. Profiling individual human red blood cells using common-path diffraction optical tomography[J]. Scientific Reports, 2014, 4: 6659.

[8] Popescu G. Quantitative phase imaging of nanoscale cell structure and dynamics[J]. Methods in Cell Biology, 2008, 90: 87-115.

[9] Mann C J, Yu L, Lo C M, et al. High-resolution quantitative phase-contrast microscopy by digital holography[J]. Optics Express, 2005, 13(22): 8693.

[10] Marquet P, Rappaz B, Magistretti P J, et al. Digital holographic microscopy: a noninvasive contrast imaging technique allowing quantitative visualization of living cells with subwavelength axial accuracy[J]. Optics Letters, 2005, 30(5): 468.

[11] Kemper B, von Bally G. Digital holographic microscopy for live cell applications and technical inspection[J]. Applied Optics, 2008, 47(4): A52.

[12] Kou S S, Waller L, Barbastathis G, et al. Transport-of-intensity approach to differential interference contrast (TI-DIC) microscopy for quantitative phase imaging[J]. Optics Letters, 2010, 35(3): 447-449.

[13] Petruccelli J C, Tian L, Barbastathis G. The transport of intensity equation for optical path length recovery using partially coherent illumination[J]. Optics Express, 2013, 21(12): 14430-14441.

[14] Zuo C, Chen Q, Qu W, et al. High-speed transport-of-intensity phase microscopy with an electrically tunable lens[J]. Optics Express, 2013, 21(20): 24060-24075.

[15] Zuo C, Chen Q, Qu W, et al. Noninterferometric single-shot quantitative phase microscopy[J]. Optics Letters, 2013, 38(18): 3538-3541.

[16] Zuo C, Chen Q, Yu Y, et al. Transport-of-intensity phase imaging using Savitzky-Golay differentiation filter-theory and applications[J]. Optics Express, 2013, 21(5): 5346-5362.

[17] Pfeiffer F, Weitkamp T, Bunk O, et al. Phase retrieval and differential phase-contrast imaging with low-brilliance X-ray sources[J]. Nature Physics, 2006, 2(4): 258.

[18] Mehta S B, Sheppard C J R. Quantitative phase-gradient imaging at high resolution with asymmetric illumination-based differential phase contrast[J]. Optics Letters, 2009, 34(13): 1924.

[19] Zheng G, Horstmeyer R, Yang C. Wide-field, high-resolution Fourier ptychographic microscopy[J]. Nature Photonics, 2013, 7(9): 739.

[20] Ou X, Horstmeyer R, Yang C, et al. Quantitative phase imaging via Fourier ptychographic microscopy[J]. Optics Letters, 2013, 38(22): 4845-4848.

[21] Tian L, Li X, Ramchandran K, et al. Multiplexed coded illumination for Fourier Ptychography with an LED array microscope[J]. Biomedical Optics Express, 2014, 5(7): 2376-2389.

[22] Zuo C, Sun J, Chen Q. Adaptive step-size strategy for noise-robust Fourier ptychographic microscopy[J]. Optics Express, 2016, 24(18): 20724-20744.

[23] Sun J, Zuo C, Zhang L, et al. Resolution-enhanced Fourier ptychographic microscopy based on high-numerical-aperture illuminations[J]. Scientific Reports, 2017, 7(1): 1187.

[24] Tian L, Waller L. Quantitative differential phase contrast imaging in an LED array microscope[J]. Optics Express, 2015, 23(9): 11394.

[25] Lee D, Ryu S, Kim U, et al. Color-coded LED microscopy for multi-contrast and quantitative phase-gradient imaging[J]. Biomedical Optics Express, 2015, 6(12): 4912.

[26] Lee W, Choi J H, Ryu S, et al. Color-coded LED microscopy for quantitative phase imaging: Implementation and application to sperm motility analysis[J]. Methods, 2018, 136: 66-74.

[27] Fan Y, Sun J, Chen Q, et al. Wide-field anti-aliased quantitative differential phase contrast microscopy[J]. Optics Express, 2018, 26(19): 25129.

[28] Lee W, Jung D, Ryu S, et al. Single-exposure quantitative phase imaging in color-coded LED microscopy[J]. Optics Express, 2017, 25(7): 8398.

[29] Chen M, Tian L, Waller L. 3D differential phase contrast microscopy[C]//SPIE, 2016, 9718: 971826.

[30] Tian L, Wang J, Waller L. 3D differential phase-contrast microscopy with computational illumination using an LED array[J]. Optics Letters, 2014, 39(5): 1326.

[31] Zheng G, Kolner C, Yang C. Microscopy refocusing and dark-field imaging by using a simple LED array[J]. Optics Letters, 2011, 36(20): 3987.

[32] Zuo C, Sun J, Feng S, et al. Programmable Colored Illumination Microscopy (PCIM): A practical and flexible optical staining approach for microscopic contrast enhancement[J]. Optics and Lasers in Engineering, 2016, 78: 35-47.

[33] Iglesias I. Pyramid phase microscopy[J]. Optics Letters, 2011, 36(18): 3636.

[34] Zuo C, Sun J, Feng S, et al. Programmable aperture microscopy: A computational method for multi-modal phase contrast and light field imaging[J]. Optics and Lasers in Engineering, 2016, 80: 24-31.

[35] Parthasarathy A B, Chu K K, Ford T N, et al. Quantitative phase imaging using a partitioned detection aperture[J]. Optics Letters, 2012, 37(19): 4062.

[36] Barankov R, Mertz J. Single-exposure surface profilometry using partitioned aperture wavefront imaging[J]. Optics Letters, 2013, 38(19): 3961.

[37] Iglesias I, Vargas-Martin F. Quantitative phase microscopy of transparent samples using a liquid crystal display[J]. Journal of Biomedical Optics, 2013, 18(2): 026015.

[38] Lu H, Chung J, Ou X, et al. Quantitative phase imaging and complex field reconstruction by pupil modulation differential phase contrast[J]. Optics Express, 2016, 24(22): 25345.

[39] Ford T N, Chu K K, Mertz J. Phase-gradient microscopy in thick tissue with oblique back-illumination[J]. Nature Methods, 2012, 9(12): 1195-1197.

[40] Ford T N, Mertz J. Video-rate imaging of microcirculation with single-exposure oblique back-illumination microscopy[J]. Journal of Biomedical Optics, 2013, 18(6): 066007.

[41] Jung D, Choi J H, Kim S, et al. Smartphone-based multi-contrast microscope using color-multiplexed illumination[J]. Scientific Reports, 2017, 7(1).

[42] Rose H. Nonstandard imaging methods in electron microscopy[J]. Ultramicroscopy, 1976, 2: 251.

[43] Bertero M, Boccacci P. Introduction to Inverse Problems in Imaging[M]. Florida: CRC Press, 1998.

[44] Lin Y Z, Huang K Y, Luo Y. Quantitative differential phase contrast imaging at high resolution with radially asymmetric illumination[J]. Optics Letters, 2018, 43(12): 2973-2976.

[45] Chen H H, Lin Y Z, Luo Y. Isotropic differential phase contrast microscopy for quantitative phase bio-imaging[J]. Journal of Biophotonics, 2018, 11(8): e201700364.

[46] Fan Y, Sun J, Chen Q, et al. Optimal illumination scheme for isotropic quantitative differential phase contrast microscopy[J]. arXiv preprint arXiv, 2019: 1903.10718.

[47] Li J, Chen Q, Sun J, et al. Optimal illumination pattern for transport-of-intensity quantitative phase microscopy[J]. Optics Express, 2018, 26(21): 27599-27614.

[48] Zuo C, Sun J, Li J, et al. High-resolution transport-of-intensity quantitative phase microscopy with annular illumination[J]. Scientific Reports, 2017, 7(1): 7654.

[49] Kellman M, Bostan E, Repina N, et al. Physics-based learned design: optimized coded-Illumination for quantitative phase imaging[J]. IEEE Transactions on Computational Imaging, 2019: 1.

[50] Chen M, Phillips Z F, Waller L. Quantitative differential phase contrast (DPC) microscopy with computational aberration correction[J]. Optics Express, 2018, 26(25): 32888.

[51] Sun J, Chen Q, Zhang Y, et al. Sampling criteria for Fourier ptychographic microscopy in object space and frequency space[J]. Optics Express, 2016, 24(14): 15765.

[52] Kellman M, Chen M, Phillips Z F, et al. Motion-resolved quantitative phase imaging[J]. Biomedical Optics Express, 2018, 9(11): 5456.

[53] Phillips Z F, Chen M, Waller L. Single-shot quantitative phase microscopy with color-multiplexed differential phase contrast (cDPC)[J]. PLOS ONE, 2017, 12(2): e0171228.

[54] Tian L, Liu Z, Yeh L H, et al. Computational illumination for high-speed in vitro Fourier ptychographic microscopy[J]. Optica, 2015, 2(10): 904.

[55] Sun J, Chen Q, Zhang J, et al. Single-shot quantitative phase microscopy based on color-multiplexed Fourier ptychography[J]. Optics Letters, 2018, 43(14): 3365.

[56] Majeed H, Sridharan S, Mir M, et al. Quantitative phase imaging for medical diagnosis[J]. Journal of Biophotonics, 2017, 10(2): 177-205.

[57] Brenner S. The genetics of Caenorhabditis elegans[J]. Genetics, 1974, 77(1): 71-94.

[58] Sheppard C, Shotton D, Sheppard C. Confocal Laser Scanning Microscopy[M]. Oxford: BIOS Scientific Publishers Ltd, 1997.

[59] Zipfel W R, Williams R M, Webb W W. Nonlinear magic: multiphoton microscopy in the biosciences[J]. Nature Biotechnology, 2003, 21(11): 1369.

[60] Tian L, Waller L. 3D intensity and phase imaging from light field measurements in an LED array microscope[J]. Optica, 2015, 2(2): 104.

[61] Zuo C, Sun J, Li J, et al. Wide-field high-resolution 3D microscopy with Fourier ptychographic diffraction tomography[J]. arXiv preprint arXiv, 2019: 1904.09386.

[62] Horstmeyer R, Chung J, Ou X, et al. Diffraction tomography with Fourier ptychography[J]. Optica, 2016, 3(8): 827.

[63] Sung Y, Choi W, Fang-Yen C, et al. Optical diffraction tomography for high resolution live cell imaging[J]. Optics Express, 2009, 17(1): 266.